Citing ACID

ECMOCO - Eddy Current and Motion Correction

Mohammadi S, Moller HE, Kugel H, Muller DK, Deppe M (2010) Correcting eddy current and motion effects by affine whole-brain registrations: evaluation of three-dimensional distortions and comparison with slicewise correction. Magn Reson Med 64: 1047-1056; doi: 10.1002/mrm.22501.

HySCO - Hyperelastic Susceptibility Artifact Correction for DTI

Ruthotto L, Kugel H, Olesch J, Fischer B, Modersitzki J, Burger M, and Wolters C H.
Diffeomorphic Susceptibility Artefact Correction of Diffusion-Weighted Magnetic Resonance Images.
Physics in Medicine and Biology, 57(18), 5715-5731; 2012, doi: 10.1088/0031-9155/57/18/5715.

Ruthotto L, Mohammadi S, Heck C, Modersitzki J, and Weiskopf N.
HySCO - Hyperelastic Susceptibility Artifact Correction of DTI in SPM.
Presented at the Bildverarbeitung fuer die Medizin 2013.

J. Modersitzki: FAIR: Flexible Algorithms for Image Registration. SIAM, Philadelphia, 2009.

Fit Diffusion Tensor

Mohammadi S, Hutton C, Nagy Z, Josephs O, Weiskopf N (2012), Retrospective correction of physiological noise in DTI using an extended tensor model and peripheral measurements. Magnetic Resonance in Medicine, (in press); doi: 10.1002/mrm.24467.

Mohammadi S, Freund P, Feiweier T, Curt A, Weiskopf N, The impact of post-processing on spinal cord diffusion tensor imaging, NeuroImage, Volume 70, 15 April 2013, Pages 377-385, doi: 10.1016/j.neuroimage.2012.12.058 .